Need Perl Program for fixing defects in small program
$250-750 USD
Closed
Posted over 10 years ago
$250-750 USD
Paid on delivery
I am attaching the details of work done by my previous programmer....most of the tasks have already been completed but this need program fixing in order to match the desired output....program is in perl....Perl expert should take 4-5 hours to fix the issue..My budget for this is $30 and need delivery asap...
Please bid only if you understand the details....
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1:M file seems to be fine.
But 1:1 file include a number of bugs as I mentioned in the last message, there are other lines include bugs just for example:
chr3L 38 688 chr3L lod=201 568 96 phastcons 58 38
chr2L 56 591 chr2L lod=142 522 55 tanay 1 225
chr2L 63 591 chr2L lod=191 561 79 phastcons 16 63
chr2L 35 591 chr2L lod=347 641 126 phastcons 91 35
chr2L 40 591 chr2L lod=156 534 104 phastcons 64 40
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You have done the overlapping value (the last coulum), but there is still chance to have an error.
I have a good way to calculate it, use it if you don't already used it, for example:
chr2L 41376 41412 36 585 chr2L 41344 41476 lod=139 519 132 phastcons 96 36
to process it:
compare: 41376 & 41344 which one is bigger, here ---> 41376
compare: 41412 & 41476 which one is smaller, here ---> 41412
then, calculate the difference: 41412 - 41376 = 36
another example:
chr2L 92 591 chr2L lod=120 499 50 tanay 42 40
compare: & which one is bigger, here --->
compare: & which one is smaller, here --->
then, calculate the difference: - = 40
regards,
I have developed such scripts while I was working in telecom domain to process CDRs call data records. Requirement is quite clear and can be delivered in one day time.